Five dollar genome analysis pipeline

Clone and run a featured workspace

Open up portal.firecloud.org

Find the pipeline

  1. Navigate to the workspace tab
  2. Navigate to “Featured Workspaces”
  3. Click on “five-dollar-genome-analysis-pipeline”
../_images/workspace.png

Clone the workspace

  1. Append your name to the workspace name (to make it unique)
  2. Clone the workspace
../_images/clone_name.png

Find the workflow

  1. Navigate to the Method Configurations tab
../_images/navigate_method.png

Select the pipeline

  1. Select the five-dollar-genome-analysis-pipeline
../_images/method.png

Launch the analysis

  1. Launch the analysis
../_images/launch_analysis.png

Select the sample

  1. Select either sample_id to run the analysis on
  2. Launch
../_images/choose_data_launch.png

Monitor the pipeline

  1. Monitor the submitted job, well done!
../_images/submitted.png